There’s something profoundly comforting about the scent of warm blueberries and vanilla wafting from the oven on a quiet morning. For years, I thought I had to give up that simple pleasure when I committed to a low carb lifestyle. Store bought keto muffins were often dry, crumbly, or packed with weird aftertastes. I was on a mission to create a muffin that didn’t just tolerate being keto, but thrived in it. After countless tests, this recipe was born in my kitchen; a triumph of tender, moist crumb, bursting with juicy blueberries, and sweetened just right. It’s the recipe my family now requests weekly, and I’m so thrilled to share it with you.
These muffins are everything you crave. They’re perfectly sweet with a delicate vanilla aroma, thanks to pure extract. The texture is the real star; incredibly tender and cake like, not at all eggy or dense like some almond flour baked goods can be. The plump blueberries melt into little pockets of jammy goodness in every bite. With a golden brown top and a satisfying, substantial feel, they are the ultimate guilt free treat that proves you don’t have to miss out.
Expert Tips for Keto Baking Success
- Don’t Overmix: Once you add the almond flour, mix just until the batter is combined. Overmixing can lead to dense muffins. Gently fold in the blueberries at the very end.
- Flour Your Berries: To prevent all your blueberries from sinking to the bottom, toss them in a teaspoon of extra almond flour before folding them into the batter. This little trick is a game changer.
- The Touch Test: Baking times can vary by oven. They’re done when the tops are firm to a gentle touch and a toothpick inserted near the center (avoiding a blueberry) comes out clean or with a few moist crumbs.
Make Ahead, Storage & Freezing
- Storage: Cool muffins completely, then store in an airtight container at room temperature for up to 2 days, or in the refrigerator for up to 1 week.
- Reheating: Warm a muffin in the microwave for 15-20 seconds to restore that just baked softness.
- Freezing: These muffins freeze beautifully! Wrap each cooled muffin individually in plastic wrap, then place them all in a large freezer bag. Freeze for up to 3 months. Thaw at room temperature or in the microwave.
Step by Step Instructions
1Prep: Start by preheating your oven to 375°F (190°C). Line a standard 12 cup muffin tin with paper liners. This ensures easy cleanup and perfect release.
2Make the Wet Base: In a large mixing bowl, whisk the 4 eggs until well beaten and slightly frothy. This adds air for lift. Add the 1/2 cup of Greek yogurt, 1 teaspoon of vanilla extract, and 2/3 cup of Swerve sweetener. Whisk vigorously until the mixture is smooth, creamy, and fully combined.
3Add Dry Ingredients: Add the 3 cups of almond flour and 1 tablespoon of baking powder directly to the wet ingredients. Using a spatula or wooden spoon, fold and stir until a thick, uniform batter forms. Remember, stop mixing once you no longer see dry flour streaks.
4Fold in Berries: Add the 1 cup of blueberries to the batter. Gently fold them in with just a few strokes to distribute them evenly without crushing them and without overworking the batter.
5Portion & Bake: Divide the batter evenly among the 12 prepared muffin cups. They should be quite full. Place the tin in the preheated oven and bake for 22-27 minutes. The muffins are done when the tops are golden brown and spring back when lightly pressed.
6Cool: Let the muffins cool in the tin for 10 minutes, then transfer them to a wire rack to cool completely. This stops the cooking process and prevents soggy bottoms.
Ingredient Substitutions
- Dairy Free/Vegan: Swap the Greek yogurt for an equal amount of unsweetened, plain dairy free yogurt (like coconut or almond milk yogurt). For the eggs, a “flax egg” substitute can be tricky here; a commercial liquid egg substitute designed for baking may work better.
- Sweetener: Any granulated, measure for measure sugar free sweetener like monk fruit or allulose can be used in place of Swerve. The bake time and texture may vary slightly.
- Berries: Fresh or frozen blueberries both work! Do not thaw frozen blueberries; toss them in almond flour straight from the freezer to prevent bleeding.
Serving Suggestions
These muffins are fantastic on their own with a pat of butter or a dollop of keto friendly whipped cream cheese. For a full brunch spread, pair them with crispy bacon or savory breakfast sausage to balance the sweetness. Enjoy them with a hot cup of bulletproof coffee or a cold glass of unsweetened almond milk.
Frequently Asked Questions (FAQ)
- Q: Can I use coconut flour instead of almond flour?
- A: No, I do not recommend it. Coconut flour is far more absorbent and cannot be substituted 1:1. It requires a completely different ratio of wet to dry ingredients.
- Q: My muffins are a little wet in the middle. What happened?
- A: This usually means they needed a few more minutes in the oven. Oven temperatures can vary. Next time, use the toothpick test and ensure it comes out clean. Also, make sure your baking powder is fresh!
- Q: How many net carbs are in each muffin?
- A: This will depend on your specific brands of ingredients. Using the listed ingredients, each muffin has approximately 4-5 grams of net carbs. Always calculate using your exact products for the most accurate count.
Recommended Equipment
- 12 Cup Standard Muffin Tin: A quality, non stick tin is essential for even baking.
- Standard Paper Baking Cups (Muffin Liners): Prevents sticking and makes cleanup a breeze.
- Large Mixing Bowl & Whisk: For creating the smooth batter base.
- Cooling Rack: Allows air to circulate so the muffins cool properly without getting soggy.

Keto Blueberry Muffins with Almond Flour
Ingredients
- 4 large eggs
- 1/2 cup plain Greek yogurt full fat recommended
- 1 teaspoon pure vanilla extract
- 3 cups blanched almond flour
- 2/3 cup granulated Swerve sweetener or other granulated erythritol
- 1 tablespoon baking powder
- 1 cup blueberries fresh or frozen, do not thaw
Instructions
- Preheat oven to 375°F (190°C). Line a 12 cup muffin tin with paper liners.
- In a large bowl, whisk the eggs until beaten. Add the Greek yogurt, vanilla extract, and Swerve. Whisk until smooth and well combined.
- Add the almond flour and baking powder to the wet ingredients. Use a spatula to mix until just combined and no dry streaks remain. Be careful not to overmix.
- Gently fold the blueberries into the batter until evenly distributed.
- Divide the batter evenly among the 12 prepared muffin cups, filling them nearly to the top.
- Bake for 22-27 minutes, or until the muffin tops are golden brown and firm to the touch, and a toothpick inserted into the center comes out clean.
- Let the muffins cool in the tin for 10 minutes before transferring them to a wire rack to cool completely.













